Sahl, S. J., Hell, S. W. & Jakobs, S. Fluorescence nanoscopy in cell biology. Nat. Rev. Mol. Cell Biol. 18, 685–701 (2017).
Strtohl, F. & Kaminski, C. F. Frontiers in structured illumination microscopy. Optica 3, 667–677 (2016).
Heintzmann, R. & Huser, T. Super-resolution structured illumination microscopy. Chem. Rev. 117, 13890–13908 (2017).
Li, D. et al. Extended-resolution structured illumination imaging of endocytic and cytoskeletal dynamics. Science 349, aab3500 (2015).
Neil, M. A. A., Juskaitis, R. & Wilson, T. Method of obtaining optical sectioning by using structured light in a conventional microscope. Opt. Lett. 22, 1905–1907 (1997).
Wicker, K. & Heintzmann, R. Resolving a misconception about structured illumination. Nat. Photonics 8, 342–344 (2014).
Gustafsson, M. G. L. Surpassing the lateral resolution limit by a factor of two using structured illumination microscopy. J. Microsc. 198, 82–87 (2000).
Heintzmann, R. & Cremer, C. Laterally modulated excitation microscopy: improvement of resolution by using a diffraction grating. Proc. SPIE 3568, 185–196 (1999).
Heintzmann, R. & Gustafsson, M. G. L. Subdiffraction resolution in continuous samples. Nat. Photonics 3, 362–364 (2009).
Gustafsson, M. G. L., Agard, D. A. & Sedat, J. W. Doubling the lateral resolution of wide-field fluorescence microscopy using structured illumination. Proc. SPIE 3919, 141–150 (2000).
Demmerle, J. et al. Strategic and practical guidelines for successful structured illumination microscopy. Nat. Protoc. 12, 988–1010 (2017).
Müller, C. B. & Enderlein, J. Image scanning microscopy. Phys. Rev. Lett. 104, 198101 (2010).
York, A. G. et al. Resolution doubling in live, multicellular organisms via multifocal structured illumination microscopy. Nat. Methods 9, 749–754 (2012).
Sheppard, C. J. R. Super-resolution in confocal imaging. Optik (Stuttg.) 80, 53–54 (1988).
Huff, J. The Airyscan detector from ZEISS: confocal imaging with improved signal-to-noise ratio and super-resolution. Nat. Methods 12, 1205 (2015).
Schulz, O. et al. Resolution doubling in fluorescence microscopy with confocal spinning-disk image scanning microscopy. Proc. Natl. Acad. Sci. USA 110, 21000–21005 (2013).
Winter, P. W. & Shroff, H. Faster fluorescence microscopy: advances in high speed biological imaging. Curr. Opin. Chem. Biol. 20, 46–53 (2014).
Roth, S., Sheppard, C. J. R., Wicker, K. & Heintzmann, R. Optical photon reassignment microscopy (OPRA). Opt. Nanoscopy 2, 5 (2013).
De Luca, G. M. R. et al. Re-scan confocal microscopy: scanning twice for better resolution. Biomed. Opt. Express 4, 2644–2656 (2013).
Azuma, T. & Kei, T. Super-resolution spinning-disk confocal microscopy using optical photon reassignment. Opt. Express 23, 15003–15011 (2015).
Shroff, H. & York, A. Multi-focal structured illumination microscopy systems and methods. US patent 9696534 (2017).
York, A. G. et al. Instant super-resolution imaging in live cells and embryos via analog image processing. Nat. Methods 10, 1122–1126 (2013).
Dan, D. et al. DMD-based LED-illumination super-resolution and optical sectioning microscopy. Sci. Rep. 3, 1116 (2013).
Cheng, L. C. et al. Nonlinear structured-illumination enhanced temporal focusing multiphoton excitation microscopy with a digital micromirror device. Biomed. Opt. Express 5, 2526–2536 (2014).
Yeh, L. H., Tian, L. & Waller, L. Structured illumination microscopy with unknown patterns and a statistical prior. Biomed. Opt. Express 8, 695–711 (2017).
Gustafsson, M. G. L. et al. Three-dimensional resolution doubling in wide-field fluorescence microscopy by structured illumination. Biophys. J. 94, 4957–4970 (2008).
Sahl, S. J. et al. Comment on “Extended-resolution structured illumination imaging of endocytic and cytoskeletal dynamics. Science 352, 527 (2016).
Li, D. & Betzig, E. Response to Comment on “Extended-resolution structured illumination imaging of endocytic and cytoskeletal dynamics”. Science 352, 527 (2016).
CAS PubMed Google Scholar
Ball, G. et al. SIMcheck: a toolbox for successful super-resolution structured illumination microscopy. Sci. Rep. 5, 15915 (2015).
Zheng, W. et al. Adaptive optics improves multiphoton super-resolution imaging. Nat. Methods 14, 869–872 (2017).
Guo, M. et al. Single-shot super-resolution total internal reflection fluorescence microscopy. Nat. Methods 15, 425–428 (2018).
Visitech International Ltd. Scanning device, system and method. UK patent application GB1806845.2 (2018).
Kner, P., Chhun, B. B., Griffis, E. R., Winoto, L. & Gustafsson, M. G. L. Super-resolution video microscopy of live cells by structured illumination. Nat. Methods 6, 339–342 (2009).
Brunstein, M., Wicker, K., Hérault, K., Heintzmann, R. & Oheim, M. Full-field dual-color 100-nm super-resolution imaging reveals organization and dynamics of mitochondrial and ER networks. Opt. Express 21, 26162–26173 (2013).
Fiolka, R., Beck, M. & Stemmer, A. Structured illumination in total internal reflection fluorescence microscopy using a spatial light modulator. Opt. Lett. 33, 1629–1631 (2008).
Förster, R. et al. Simple structured illumination microscope setup with high acquisition speed by using a spatial light modulator. Opt. Express 22, 20663–20677 (2014).
Sochacki, K. A., Dickey, A. M., Strub, M. P. & Taraska, J. W. Endocytic proteins are partitioned at the edge of the clathrin lattice in mammalian cells. Nat. Cell Biol. 19, 352–361 (2017).
Nixon-Abell, J. et al. Increased spatiotemporal resolution reveals highly dynamic dense tubular matrices in the peripheral ER. Science 354, aaf3928 (2016).
Huang, X. et al. Fast, long-term, super-resolution imaging with Hessian structured illumination microscopy. Nat. Biotechnol. 36, 451–459 (2018).
Shao, L., Kner, P., Rego, E. H. & Gustafsson, M. G. Super-resolution 3D microscopy of live whole cells using structured illumination. Nat. Methods 8, 1044–1046 (2011).
Fiolka, R., Shao, L., Rego, E. H., Davidson, M. W. & Gustafsson, M. G. L. Time-lapse two-color 3D imaging of live cells with doubled resolution using structured illumination. Proc. Natl. Acad. Sci. USA 109, 5311–5315 (2012).
Lesterlin, C., Ball, G., Schermelleh, L. & Sherratt, D. J. RecA bundles mediate hom*ology pairing between distant sisters during DNA break repair. Nature 506, 249–253 (2014).
Ingaramo, M. et al. Two-photon excitation improves multifocal structured illumination microscopy in thick scattering tissue. Proc. Natl. Acad. Sci. USA 111, 5254–5259 (2014).
Winter, P. W. et al. Two-photon instant structured illumination microscopy improves the depth penetration of super-resolution imaging in thick scattering samples. Optica 1, 181–191 (2014).
Gregor, I. et al. Rapid nonlinear image scanning microscopy. Nat. Methods 14, 1087–1089 (2017).
Wang, K. et al. Direct wavefront sensing for high-resolution in vivo imaging in scattering tissue. Nat. Commun. 6, 7276 (2015).
Booth, M. J. Wavefront sensorless adaptive optics for large aberrations. Opt. Lett. 32, 5–7 (2007).
Thomas, B., Wolstenholme, A., Chaudhari, S. N., Kipreos, E. T. & Kner, P. Enhanced resolution through thick tissue with structured illumination and adaptive optics. J. Biomed. Opt. 20, 26006 (2015).
Power, R. M. & Huisken, J. A guide to light-sheet fluorescence microscopy for multiscale imaging. Nat. Methods 14, 360–373 (2017).
Breuninger, T., Greger, K. & Stelzer, E. H. K. Lateral modulation boosts image quality in single plane illumination fluorescence microscopy. Opt. Lett. 32, 1938–1940 (2007).
Keller, P. J. et al. Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy. Nat. Methods 7, 637–642 (2010).
Planchon, T. A. et al. Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination. Nat. Methods 8, 417–423 (2011).
Gao, L. et al. Noninvasive imaging beyond the diffraction limit of 3D dynamics in thickly fluorescent specimens. Cell 151, 1370–1385 (2012).
Chen, B. C. et al. Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution. Science 346, 1257998 (2014).
Chang, B. J., Perez Meza, V. D. & Stelzer, E. H. K. csiLSFM combines light-sheet fluorescence microscopy and coherent structured illumination for a lateral resolution below 100 nm. Proc. Natl. Acad. Sci. USA 114, 4869–4874 (2017).
Gustafsson, M. G. L. Nonlinear structured-illumination microscopy: wide-field fluorescence imaging with theoretically unlimited resolution. Proc. Natl. Acad. Sci. USA 102, 13081–13086 (2005).
Heintzmann, R., Jovin, T. M. & Cremer, C. Saturated patterned excitation microscopy—a concept for optical resolution improvement. J. Opt. Soc. Am. A Opt. Image Sci. Vis. 19, 1599–1609 (2002).
Rego, E. H. et al. Nonlinear structured-illumination microscopy with a photoswitchable protein reveals cellular structures at 50-nm resolution. Proc. Natl. Acad. Sci. USA 109, E135–E143 (2012).
Zhang, X. et al. Highly photostable, reversibly photoswitchable fluorescent protein with high contrast ratio for live-cell superresolution microscopy. Proc. Natl. Acad. Sci. USA 113, 10364–10369 (2016).
Curd, A. et al. Construction of an instant structured illumination microscope. Methods 88, 37–47 (2015).
Young, L. J., Ströhl, F. & Kaminski, C. F. A guide to structured illumination TIRF microscopy at high speed with multiple colors. J. Vis. Exp. https://doi.org/10.3791/53988 (2016).
Laissue, P. P., Alghamdi, R. A., Tomancak, P., Reynaud, E. G. & Shroff, H. Assessing phototoxicity in live fluorescence imaging. Nat. Methods 14, 657–661 (2017).
Grimm, J. B. et al. A general method to improve fluorophores for live-cell and single-molecule microscopy. Nat. Methods 12, 244–250 (2015).
Weigert, M. et al. Content-aware image restoration: pushing the limits of fluorescence microscopy. bioRxiv Preprint at https://www.biorxiv.org/content/early/2018/07/03/236463 (2018).
Ouyang, W., Aristov, A., Lelek, M., Hao, X. & Zimmer, C. Deep learning massively accelerates super-resolution localization microscopy. Nat. Biotechnol. 36, 460–468 (2018).
Christiansen, E. M. et al. In silico labeling: predicting fluorescent labels in unlabeled images. Cell 173, 792–803 (2018).
